Examples
Worked examples
- Is an instance
An nf-core/rnaseq pipeline run on AWS Batch using Singularity images.
- Is an instance
A custom Nextflow workflow distributed alongside a paper with a pinned configuration profile.
Counter-examples
Looks similar, but isn't
- Not an instance
A Snakemake pipeline (different ecosystem).
- Not an instance
A non-workflow shell script.
Editorial commentary
Nextflow's processes communicate via typed channels, enabling implicit parallelism and easy scaling from laptop to HPC to cloud. The nf-core community curates dozens of standardised, peer-reviewed pipelines. As with Snakemake, this entry covers the conceptual pattern rather than version-specific behaviour.
References
- Di Tommaso et al., 'Nextflow enables reproducible computational workflows' (Nature Biotechnology, 2017); nf-core community publications.
Also known as
Nextflow
Machine-readable encodings
Use in your systems
xml
<role vocab="credit"
vocab-identifier="https://casrai.org/dictionary/"
vocab-term="Nextflow (concept)"
vocab-term-identifier="https://casrai.org/dictionary/term/nextflow-concept" />json
{
"@context": "https://schema.org",
"@type": "DefinedTerm",
"name": "Nextflow (concept)",
"identifier": "https://casrai.org/dictionary/term/nextflow-concept",
"description": "A workflow orchestration system based on dataflow programming with a Groovy-based domain-specific language, designed for scalable, container-native, multi-platform execution of computational pipelines.",
"inDefinedTermSet": "https://casrai.org/dictionary/domain/reproducibility-and-computational-research/",
"url": "https://casrai.org/dictionary/term/nextflow-concept",
"sameAs": [
"Nextflow"
],
"license": "https://creativecommons.org/licenses/by/4.0/"
}
